Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | ASC92_17225 | Not Available | Positive | 4822165 - 4822632 | 17056.8 |
| marr family transcriptional regulator | ASC92_17230 | Not Available | Positive | 4822709 - 4823209 | 17882.0 |
| coa-transferase | ASC92_17235 | Not Available | Negative | 4823274 - 4824845 | 55650.0 |
| acetyl-coa acetyltransferase | ASC92_17240 | Not Available | Negative | 4824889 - 4826136 | 43521.5 |
| acetyl-coa acetyltransferase | ASC92_17245 | Not Available | Negative | 4826140 - 4827351 | 42867.1 |
| enoyl-coa hydratase | ASC92_17250 | Not Available | Positive | 4827509 - 4828294 | 27860.7 |
| feruloyl-coa synthase | ASC92_17255 | Not Available | Positive | 4828323 - 4830191 | 67359.5 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | ASC92_17260 | Not Available | Positive | 4830214 - 4830999 | 26771.4 |
| branched-chain amino acid abc transporter substrate-binding protein | ASC92_17265 | Not Available | Positive | 4831043 - 4832182 | 39788.1 |
| abc transporter permease | ASC92_17270 | Not Available | Positive | 4832210 - 4833250 | 36145.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
