Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix farnesyltransferase | ASC92_17125 | Not Available | Negative | 4803428 - 4804333 | 33147.3 |
| cytochrome c oxidase subunit i | ASC92_17130 | Not Available | Negative | 4804330 - 4805550 | 43580.3 |
| hypothetical protein | ASC92_17135 | Not Available | Negative | 4805660 - 4806340 | 25019.2 |
| transmembrane cytochrome oxidase | ASC92_17140 | Not Available | Negative | 4806327 - 4807178 | 31205.5 |
| hypothetical protein | ASC92_17145 | Not Available | Positive | 4807206 - 4807436 | 8417.89 |
| mfs transporter | ASC92_17150 | Not Available | Negative | 4807517 - 4808398 | 32906.0 |
| hypothetical protein | ASC92_17155 | Not Available | Negative | 4808462 - 4808677 | 7691.48 |
| cytochrome c oxidase assembly protein | ASC92_17160 | Not Available | Negative | 4808674 - 4809327 | 23802.7 |
| cytochrome oxidase subunit i | ASC92_17165 | Not Available | Negative | 4809488 - 4811128 | 60920.3 |
| cytochrome c oxidase subunit ii | ASC92_17170 | Not Available | Negative | 4811172 - 4812350 | 42776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
