Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | ASC92_17075 | Not Available | Negative | 4793833 - 4794486 | 22780.2 |
| amino acid transporter | ASC92_17080 | Not Available | Negative | 4794521 - 4795156 | 21776.3 |
| lysr family transcriptional regulator | ASC92_17085 | Not Available | Positive | 4795232 - 4796146 | 32327.0 |
| zinc protease | ASC92_17090 | Not Available | Negative | 4796151 - 4797524 | 48645.3 |
| peptidase m16 | ASC92_17095 | Not Available | Negative | 4797543 - 4798982 | 52080.1 |
| signal recognition particle-docking protein ftsy | ASC92_17100 | Not Available | Positive | 4799012 - 4800262 | 43238.1 |
| hypothetical protein | ASC92_17105 | Not Available | Positive | 4800408 - 4800872 | 17116.4 |
| rna polymerase factor sigma-32 | ASC92_17110 | Not Available | Positive | 4800970 - 4801911 | 34548.3 |
| dna alkylation repair protein | ASC92_17115 | Not Available | Negative | 4801962 - 4802786 | 30368.5 |
| photosynthetic protein synthase i | ASC92_17120 | Not Available | Negative | 4802800 - 4803417 | 22009.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
