Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-oxalocrotonate tautomerase | ASC92_17025 | Not Available | Positive | 4785129 - 4785527 | 14395.3 |
| hypothetical protein | ASC92_17030 | Not Available | Positive | 4785570 - 4786928 | 48953.6 |
| amidohydrolase | ASC92_17035 | Not Available | Positive | 4787078 - 4788673 | 56523.4 |
| phosphoglycerate kinase | ASC92_17040 | Not Available | Negative | 4788690 - 4789391 | 26038.8 |
| alpha/beta hydrolase | ASC92_17045 | Not Available | Positive | 4789433 - 4790143 | 25559.1 |
| pyrrolidone-carboxylate peptidase | ASC92_17050 | Not Available | Negative | 4790158 - 4790820 | 23435.5 |
| hypothetical protein | ASC92_17055 | Not Available | Negative | 4790846 - 4791586 | 26213.3 |
| allophanate hydrolase | ASC92_17060 | Not Available | Negative | 4791622 - 4792620 | 34688.9 |
| allophanate hydrolase | ASC92_17065 | Not Available | Negative | 4792617 - 4793279 | 23275.9 |
| phosphopantetheine adenylyltransferase | ASC92_17070 | Not Available | Negative | 4793286 - 4793789 | 18539.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
