Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | ASC92_16855 | Not Available | Positive | 4746781 - 4747920 | 43464.1 |
| carnitine dehydratase | ASC92_16860 | Not Available | Positive | 4748046 - 4749269 | 43878.7 |
| twin-arginine translocation pathway signal | ASC92_16865 | Not Available | Positive | 4749313 - 4750278 | 33470.8 |
| gntr family transcriptional regulator | ASC92_16870 | Not Available | Positive | 4750377 - 4751132 | 27575.2 |
| aldo/keto reductase | ASC92_16875 | Not Available | Negative | 4751310 - 4752167 | 30794.3 |
| tartrate dehydrogenase | ASC92_16880 | Not Available | Positive | 4752439 - 4753539 | 39963.8 |
| peptide abc transporter permease | ASC92_16890 | Not Available | Positive | 4755020 - 4755901 | 30864.6 |
| abc transporter | ASC92_16895 | Not Available | Positive | 4755907 - 4756902 | 35119.2 |
| peptide abc transporter atp-binding protein | ASC92_16900 | Not Available | Positive | 4756899 - 4757717 | 29926.0 |
| abc transporter substrate-binding protein | ASC92_16905 | Not Available | Positive | 4757765 - 4759258 | 54287.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
