Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase | ASC92_02120 | Not Available | Positive | 470576 - 471478 | 32363.0 |
| adp-ribose pyrophosphatase | ASC92_02125 | Not Available | Positive | 471621 - 472196 | 21321.5 |
| hypothetical protein | ASC92_02130 | Not Available | Positive | 472186 - 472413 | 8430.21 |
| utp--glucose-1-phosphate uridylyltransferase | ASC92_02135 | Not Available | Negative | 472481 - 473371 | 32188.1 |
| valine--trna ligase | ASC92_02140 | Not Available | Negative | 473474 - 476353 | 108008.0 |
| hypothetical protein | ASC92_02145 | Not Available | Positive | 476460 - 477245 | 29466.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 477086 - 478628 | Not Available |
| proline dioxygenase | ASC92_02150 | Not Available | Positive | 477399 - 478241 | 30697.8 |
| alpha/beta hydrolase | ASC92_02155 | Not Available | Positive | 478253 - 479155 | 32188.3 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | ASC92_02160 | Not Available | Positive | 479152 - 480018 | 32439.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
