Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phob family transcriptional regulator | ASC92_16805 | Not Available | Negative | 4736324 - 4737010 | 25293.9 |
| hypothetical protein | ASC92_16810 | Not Available | Negative | 4737007 - 4738659 | 60305.6 |
| lysr family transcriptional regulator | ASC92_16815 | Not Available | Positive | 4738795 - 4739730 | 33902.6 |
| abc transporter substrate-binding protein | ASC92_16820 | Not Available | Negative | 4739816 - 4740733 | 32859.6 |
| glyoxalase | ASC92_16825 | Not Available | Negative | 4740743 - 4741174 | 16002.9 |
| nitrate reductase | ASC92_16830 | Not Available | Positive | 4741504 - 4742997 | 53694.0 |
| asp/glu/hydantoin racemase | ASC92_16835 | Not Available | Positive | 4743019 - 4743759 | 26061.8 |
| phenylacetic acid degradation protein | ASC92_16840 | Not Available | Negative | 4743766 - 4744215 | 15941.2 |
| transcriptional regulator | ASC92_16845 | Not Available | Negative | 4744221 - 4745018 | 28763.1 |
| acetate--coa ligase | ASC92_16850 | Not Available | Positive | 4745184 - 4746740 | 56737.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
