Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate oxidoreductase | ASC92_16705 | Not Available | Positive | 4712251 - 4713867 | 57188.6 |
| alpha-hydroxy-acid oxidizing enzyme | ASC92_16710 | Not Available | Positive | 4713890 - 4715131 | 44756.5 |
| c4-dicarboxylate abc transporter | ASC92_16715 | Not Available | Positive | 4715232 - 4716251 | 36791.2 |
| c4-dicarboxylate abc transporter permease | ASC92_16720 | Not Available | Positive | 4716279 - 4716779 | 18725.0 |
| c4-dicarboxylate abc transporter permease | ASC92_16725 | Not Available | Positive | 4716776 - 4718077 | 45885.4 |
| 4-hydroxybenzoyl-coa thioesterase | ASC92_16730 | Not Available | Positive | 4718077 - 4718499 | 15867.8 |
| hypothetical protein | ASC92_16735 | Not Available | Positive | 4718841 - 4719035 | 7236.68 |
| magnesium-translocating p-type atpase | ASC92_16740 | Not Available | Positive | 4719254 - 4722019 | 101061.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | ASC92_16745 | Not Available | Negative | 4722328 - 4723770 | 50624.9 |
| hydroxypyruvate reductase | ASC92_16750 | Not Available | Negative | 4723932 - 4725272 | 46393.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
