Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_16555 | Not Available | Positive | 4673698 - 4674579 | 31655.4 |
| hypothetical protein | ASC92_16560 | Not Available | Negative | 4674576 - 4675679 | 40001.0 |
| lysr family transcriptional regulator | ASC92_16565 | Not Available | Negative | 4675813 - 4676754 | 34154.4 |
| mfs transporter | ASC92_16570 | Not Available | Positive | 4676851 - 4678146 | 44519.1 |
| adenosine deaminase | ASC92_16575 | Not Available | Negative | 4678107 - 4679168 | 39181.7 |
| iclr family transcriptional regulator | ASC92_16580 | Not Available | Negative | 4679250 - 4680053 | 29278.2 |
| abc transporter substrate-binding protein | ASC92_16585 | Not Available | Positive | 4680246 - 4681022 | 27530.6 |
| amino acid abc transporter permease | ASC92_16590 | Not Available | Positive | 4681190 - 4681861 | 24290.6 |
| glutamine abc transporter atp-binding protein | ASC92_16595 | Not Available | Positive | 4681864 - 4682628 | 27530.4 |
| fad-dependent oxidoreductase | ASC92_16600 | Not Available | Positive | 4682625 - 4683911 | 45330.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
