Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | ASC92_02070 | Not Available | Positive | 462907 - 463848 | 34514.6 |
| hypothetical protein | ASC92_02075 | Not Available | Positive | 464061 - 464600 | 19437.7 |
| 3-dehydroquinate dehydratase | ASC92_02080 | Not Available | Negative | 464663 - 465100 | 15901.2 |
| shikimate dehydrogenase | ASC92_02085 | Not Available | Negative | 465116 - 465937 | 28719.6 |
| coa-transferase | ASC92_02090 | Not Available | Negative | 465951 - 467174 | 43548.1 |
| acyl dehydratase | ASC92_02095 | Not Available | Negative | 467231 - 467686 | 16869.2 |
| glyoxalase | ASC92_02100 | Not Available | Negative | 467712 - 468098 | 14069.0 |
| 2-dehydropantoate 2-reductase | ASC92_02105 | Not Available | Negative | 468095 - 469024 | 32180.1 |
| lysr family transcriptional regulator | ASC92_02110 | Not Available | Positive | 469113 - 470075 | 35251.7 |
| Trna-leu | Not Available | Not Available | Positive | 470449 - 470533 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
