Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | ASC92_16305 | Not Available | Positive | 4611484 - 4612545 | 38484.6 |
| hypothetical protein | ASC92_16310 | Not Available | Positive | 4612565 - 4612789 | 7986.41 |
| isoquinoline 1-oxidoreductase | ASC92_16315 | Not Available | Positive | 4612973 - 4613476 | 17438.3 |
| aldehyde dehydrogenase | ASC92_16320 | Not Available | Positive | 4613473 - 4615725 | 78849.5 |
| alcohol dehydrogenase | ASC92_16325 | Not Available | Positive | 4615722 - 4617026 | 46217.6 |
| transporter | ASC92_16330 | Not Available | Positive | 4617438 - 4620518 | 96772.6 |
| alpha/beta hydrolase | ASC92_16335 | Not Available | Negative | 4620549 - 4621550 | 35336.1 |
| diguanylate phosphodiesterase | ASC92_16340 | Not Available | Positive | 4621916 - 4623298 | 50279.0 |
| hypothetical protein | ASC92_16345 | Not Available | Positive | 4623295 - 4623561 | 9749.81 |
| crp/fnr family transcriptional regulator | ASC92_16350 | Not Available | Positive | 4623593 - 4624375 | 28553.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
