Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | ASC92_16205 | Not Available | Negative | 4596051 - 4596713 | 23415.5 |
| abc transporter atp-binding protein | ASC92_16210 | Not Available | Negative | 4596706 - 4597575 | 31776.5 |
| metal abc transporter substrate-binding protein | ASC92_16215 | Not Available | Positive | 4597816 - 4598628 | 28980.8 |
| peptide chain release factor 2 | ASC92_16220 | Not Available | Positive | 4599035 - 4599937 | 33501.2 |
| haloacid dehalogenase | ASC92_16225 | Not Available | Positive | 4599937 - 4600608 | 24346.1 |
| aminopeptidase | ASC92_16230 | Not Available | Positive | 4600595 - 4603288 | 99901.0 |
| fructose 1,6-bisphosphatase | ASC92_16235 | Not Available | Positive | 4603312 - 4604325 | 37517.1 |
| Trna-thr | Not Available | Not Available | Positive | 4604351 - 4604426 | Not Available |
| nad-dependent deacylase | ASC92_16245 | Not Available | Negative | 4604532 - 4605248 | 26176.8 |
| Trna-asn | Not Available | Not Available | Positive | 4605284 - 4605360 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
