Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_15740 | Not Available | Positive | 4503399 - 4504061 | 24866.7 |
| mfs transporter | ASC92_15750 | Not Available | Positive | 4504785 - 4506134 | 47894.7 |
| asp/glu/hydantoin racemase | ASC92_15755 | Not Available | Negative | 4506341 - 4506991 | 23505.8 |
| abc transporter substrate-binding protein | ASC92_15760 | Not Available | Negative | 4507023 - 4508015 | 34822.4 |
| oxidoreductase | ASC92_15765 | Not Available | Positive | 4508990 - 4509742 | 25844.9 |
| 3-keto-5-aminohexanoate cleavage protein | ASC92_15770 | Not Available | Positive | 4509798 - 4510721 | 33767.6 |
| arac family transcriptional regulator | ASC92_15775 | Not Available | Positive | 4510980 - 4511849 | 31905.0 |
| nad(p)-dependent oxidoreductase | ASC92_15780 | Not Available | Negative | 4511964 - 4512848 | 31776.3 |
| tetr family transcriptional regulator | ASC92_15785 | Not Available | Positive | 4512932 - 4513516 | 21050.5 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | ASC92_15790 | Not Available | Negative | 4513537 - 4514427 | 31704.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
