Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase | ASC92_15640 | Not Available | Positive | 4478898 - 4479896 | 34601.9 |
| hypothetical protein | ASC92_15645 | Not Available | Positive | 4479896 - 4480492 | 20605.0 |
| hypothetical protein | ASC92_15650 | Not Available | Positive | 4480537 - 4481409 | 30823.1 |
| hypothetical protein | ASC92_15655 | Not Available | Positive | 4481423 - 4483246 | 64363.2 |
| hypothetical protein | ASC92_15660 | Not Available | Positive | 4483325 - 4484455 | 39922.0 |
| abc transporter atp-binding protein | ASC92_15665 | Not Available | Positive | 4484484 - 4485233 | 26803.6 |
| 2-hydroxy-acid oxidase | ASC92_15670 | Not Available | Positive | 4485259 - 4486665 | 50359.6 |
| hypothetical protein | ASC92_15675 | Not Available | Negative | 4487051 - 4488604 | 55674.6 |
| hypothetical protein | ASC92_15680 | Not Available | Negative | 4488690 - 4490327 | 61792.8 |
| acyl-coa dehydrogenase | ASC92_15685 | Not Available | Negative | 4490404 - 4491564 | 42426.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
