Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilv | ASC92_15490 | Not Available | Negative | 4446251 - 4446769 | 17721.0 |
| n-terminal methylation site | ASC92_15495 | Not Available | Negative | 4446796 - 4447245 | 15618.0 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | ASC92_15500 | Not Available | Positive | 4447530 - 4448657 | 39441.4 |
| riboflavin synthase subunit alpha | ASC92_15505 | Not Available | Positive | 4448791 - 4449453 | 23174.6 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | ASC92_15510 | Not Available | Positive | 4449450 - 4450604 | 40801.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | ASC92_15515 | Not Available | Positive | 4450611 - 4451087 | 16472.7 |
| antitermination protein nusb | ASC92_15520 | Not Available | Positive | 4451084 - 4451629 | 20040.8 |
| aminotransferase | ASC92_15525 | Not Available | Positive | 4451626 - 4452822 | 43838.2 |
| 4-hydroxybenzoyl-coa thioesterase | ASC92_15530 | Not Available | Positive | 4452819 - 4453277 | 17252.6 |
| protein tolq | ASC92_15535 | Not Available | Positive | 4453274 - 4453993 | 25978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
