Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_15440 | Not Available | Positive | 4429923 - 4430519 | 21273.5 |
| hypothetical protein | ASC92_15445 | Not Available | Negative | 4430606 - 4433467 | 100973.0 |
| hypothetical protein | ASC92_15450 | Not Available | Negative | 4433669 - 4437484 | 134211.0 |
| lytic transglycosylase | ASC92_15455 | Not Available | Positive | 4438085 - 4438936 | 29973.1 |
| serine hydroxymethyltransferase | ASC92_15460 | Not Available | Positive | 4439133 - 4440377 | 44860.9 |
| nrdr family transcriptional regulator | ASC92_15465 | Not Available | Positive | 4440399 - 4440842 | 17123.7 |
| n-terminal cleavage protein | ASC92_15470 | Not Available | Negative | 4440866 - 4441327 | 16484.7 |
| pilus assembly protein pily | ASC92_15475 | Not Available | Negative | 4441347 - 4444703 | 117219.0 |
| pilus assembly protein pilx | ASC92_15480 | Not Available | Negative | 4444753 - 4445442 | 24315.7 |
| pilus assembly protein pilw | ASC92_15485 | Not Available | Negative | 4445439 - 4446254 | 28782.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
