Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | ASC92_15390 | Not Available | Negative | 4420873 - 4422141 | 45490.5 |
| trna(ile)-lysidine synthetase | ASC92_15395 | Not Available | Negative | 4422196 - 4423173 | 35183.1 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | ASC92_15400 | Not Available | Negative | 4423189 - 4424169 | 36631.8 |
| dna-3-methyladenine glycosylase | ASC92_15405 | Not Available | Negative | 4424186 - 4424836 | 24275.4 |
| cysteine--trna ligase | ASC92_15410 | Not Available | Negative | 4424854 - 4426230 | 50981.5 |
| hypothetical protein | ASC92_15415 | Not Available | Positive | 4426435 - 4427025 | 21483.6 |
| peptidylprolyl isomerase | ASC92_15420 | Not Available | Positive | 4427147 - 4427695 | 19096.7 |
| cyclophilin | ASC92_15425 | Not Available | Positive | 4427723 - 4428235 | 18373.8 |
| udp-2,3-diacylglucosamine hydrolase | ASC92_15430 | Not Available | Positive | 4428265 - 4429020 | 28204.5 |
| hypothetical protein | ASC92_15435 | Not Available | Positive | 4429037 - 4429828 | 29227.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
