Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase | ASC92_15340 | Not Available | Positive | 4409667 - 4410473 | 30678.9 |
| hypothetical protein | ASC92_15345 | Not Available | Negative | 4410505 - 4411173 | 23503.0 |
| histidine kinase | ASC92_15350 | Not Available | Positive | 4411400 - 4413286 | 69545.6 |
| lysr family transcriptional regulator | ASC92_15355 | Not Available | Negative | 4413314 - 4414258 | 35088.1 |
| hypothetical protein | ASC92_15360 | Not Available | Positive | 4414392 - 4415387 | 35434.6 |
| galactonate dehydratase | ASC92_15365 | Not Available | Positive | 4415443 - 4416966 | 54148.7 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | ASC92_15370 | Not Available | Positive | 4417013 - 4417828 | 28074.7 |
| gntr family transcriptional regulator | ASC92_15375 | Not Available | Negative | 4417909 - 4419372 | 52947.2 |
| aspartate aminotransferase | ASC92_15380 | Not Available | Positive | 4419476 - 4420600 | 39467.4 |
| Trna-ser | Not Available | Not Available | Positive | 4420754 - 4420846 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
