Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase inhibitor i78 | ASC92_01965 | Not Available | Positive | 440819 - 441136 | 10514.7 |
| peptidase m48 | ASC92_01975 | Not Available | Positive | 441491 - 443344 | 70515.1 |
| sam-dependent methyltransferase | ASC92_01980 | Not Available | Positive | 443386 - 444657 | 46611.1 |
| aminotransferase | ASC92_01985 | Not Available | Positive | 444790 - 446004 | 46004.6 |
| 50s ribosomal protein l33 | ASC92_01990 | Not Available | Negative | 446181 - 446354 | 6547.1 |
| 50s ribosomal protein l28 | ASC92_01995 | Not Available | Negative | 446366 - 446599 | 8779.65 |
| thioredoxin reductase | ASC92_02000 | Not Available | Negative | 446782 - 447741 | 34398.1 |
| hypothetical protein | ASC92_02005 | Not Available | Positive | 447922 - 448596 | 24956.5 |
| cell division protein ftsk | ASC92_02010 | Not Available | Positive | 448695 - 451130 | 88376.2 |
| outer membrane lipoprotein carrier protein lola | ASC92_02015 | Not Available | Positive | 451291 - 451923 | 22722.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
