Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | ASC92_15290 | Not Available | Positive | 4397161 - 4397856 | 26088.3 |
| rnd transporter | ASC92_15295 | Not Available | Positive | 4397853 - 4399346 | 52031.7 |
| rnd transporter | ASC92_15300 | Not Available | Positive | 4399343 - 4400545 | 41533.8 |
| rnd transporter | ASC92_15305 | Not Available | Positive | 4400566 - 4403682 | 111512.0 |
| tripartite tricarboxylate transporter tcta | ASC92_15310 | Not Available | Negative | 4403757 - 4405280 | 52833.1 |
| tripartite tricarboxylate transporter tctb | ASC92_15315 | Not Available | Negative | 4405282 - 4405818 | 18695.8 |
| c4-dicarboxylate abc transporter substrate-binding protein | ASC92_15320 | Not Available | Negative | 4405958 - 4406917 | 32768.6 |
| two-component system response regulator | ASC92_15325 | Not Available | Positive | 4407055 - 4407738 | 25027.7 |
| histidine kinase | ASC92_15330 | Not Available | Positive | 4407735 - 4409165 | 51947.9 |
| rna-binding protein | ASC92_15335 | Not Available | Positive | 4409185 - 4409619 | 16224.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
