Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | ASC92_15190 | Not Available | Negative | 4377544 - 4378743 | 41351.1 |
| potassium transport protein kup | ASC92_15195 | Not Available | Negative | 4378837 - 4380681 | 66120.3 |
| squalene synthase hpnc | ASC92_15200 | Not Available | Positive | 4380833 - 4381747 | 33921.9 |
| squalene synthase hpnd | ASC92_15205 | Not Available | Positive | 4381744 - 4382583 | 31511.0 |
| desaturase | ASC92_15210 | Not Available | Positive | 4382580 - 4383845 | 44397.0 |
| hypothetical protein | ASC92_15215 | Not Available | Positive | 4383842 - 4384150 | 11263.7 |
| lysine transporter lyse | ASC92_15220 | Not Available | Negative | 4384157 - 4384798 | 22750.3 |
| nipsnap family containing protein | ASC92_15225 | Not Available | Positive | 4384914 - 4385219 | 11932.2 |
| had family hydrolase | ASC92_15230 | Not Available | Negative | 4385223 - 4385954 | 26382.7 |
| ferrochelatase | ASC92_15235 | Not Available | Positive | 4385970 - 4386989 | 37471.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
