Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ASC92_15040 | Not Available | Negative | 4345276 - 4345944 | 25149.3 |
| prolipoprotein diacylglyceryl transferase | ASC92_15045 | Not Available | Negative | 4346069 - 4346899 | 31229.5 |
| lysr family transcriptional regulator | ASC92_15050 | Not Available | Negative | 4347033 - 4347992 | 34607.3 |
| dihydroxy-acid dehydratase | ASC92_15055 | Not Available | Positive | 4348093 - 4349787 | 59219.6 |
| hypothetical protein | ASC92_15060 | Not Available | Negative | 4349901 - 4350152 | 9747.95 |
| cytochrome c' | ASC92_15065 | Not Available | Positive | 4350258 - 4350572 | 10679.1 |
| signal transduction histidine kinase | ASC92_15070 | Not Available | Negative | 4350585 - 4351085 | 18584.7 |
| acetyl-coenzyme a synthetase | ASC92_15075 | Not Available | Negative | 4351228 - 4353225 | 72713.1 |
| hypothetical protein | ASC92_15080 | Not Available | Positive | 4353372 - 4354007 | 23085.6 |
| lysr family transcriptional regulator | ASC92_15085 | Not Available | Negative | 4354004 - 4354912 | 33077.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
