Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | ASC92_14835 | Not Available | Positive | 4301257 - 4301904 | 23849.2 |
| lysozyme inhibitor | ASC92_14840 | Not Available | Positive | 4301917 - 4302759 | 30486.5 |
| phosphoglycerate kinase | ASC92_14845 | Not Available | Negative | 4302786 - 4303352 | 20204.9 |
| cobalamin synthase | ASC92_14850 | Not Available | Negative | 4303349 - 4304143 | 26929.6 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | ASC92_14855 | Not Available | Negative | 4304149 - 4305189 | 35510.2 |
| cobalamin biosynthesis protein cobq | ASC92_14860 | Not Available | Negative | 4305186 - 4306646 | 51826.1 |
| hypothetical protein | ASC92_14865 | Not Available | Positive | 4306812 - 4307045 | 8430.79 |
| rnd transporter | ASC92_14870 | Not Available | Negative | 4307110 - 4308603 | 52446.1 |
| transporter | ASC92_14875 | Not Available | Negative | 4308619 - 4311882 | 116189.0 |
| rnd transporter mfp subunit | ASC92_14880 | Not Available | Negative | 4311923 - 4313173 | 44032.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
