Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | ASC92_01915 | Not Available | Negative | 428564 - 431413 | 106004.0 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | ASC92_01920 | Not Available | Negative | 431536 - 432573 | 37384.7 |
| restriction endonuclease | ASC92_01925 | Not Available | Positive | 432738 - 433298 | 21033.3 |
| biotin carboxylase | ASC92_01930 | Not Available | Positive | 433493 - 434611 | 39974.3 |
| permease | ASC92_01935 | Not Available | Positive | 434595 - 435371 | 27842.3 |
| enoyl-coa hydratase | ASC92_01940 | Not Available | Negative | 435484 - 436272 | 27860.8 |
| twin-arginine translocation pathway signal | ASC92_01945 | Not Available | Negative | 436286 - 437650 | 48049.7 |
| acyl-coa dehydrogenase | ASC92_01950 | Not Available | Negative | 437744 - 438859 | 39997.8 |
| pimeloyl-coa dehydrogenase large subunit | ASC92_01955 | Not Available | Negative | 438872 - 440053 | 43907.6 |
| phosphoribosylglycinamide formyltransferase | ASC92_01960 | Not Available | Positive | 440185 - 440781 | 20818.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
