Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ASC92_14785 | Not Available | Positive | 4289878 - 4291293 | 51940.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ASC92_14790 | Not Available | Negative | 4291307 - 4291795 | 16974.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ASC92_14795 | Not Available | Negative | 4291792 - 4292514 | 25510.7 |
| transcription-repair coupling factor | ASC92_14800 | Not Available | Positive | 4292634 - 4296116 | 129284.0 |
| phosphoserine phosphatase | ASC92_14805 | Not Available | Positive | 4296122 - 4296835 | 25648.3 |
| lactate dehydrogenase | ASC92_14810 | Not Available | Positive | 4297135 - 4298199 | 37755.5 |
| hypothetical protein | ASC92_14815 | Not Available | Negative | 4298207 - 4298533 | 12336.7 |
| acetylpolyamine aminohydrolase | ASC92_14820 | Not Available | Positive | 4298657 - 4299679 | 36589.1 |
| hypothetical protein | ASC92_14825 | Not Available | Positive | 4299718 - 4299945 | 7982.84 |
| aspartate aminotransferase | ASC92_14830 | Not Available | Negative | 4299958 - 4301145 | 42399.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
