Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase rimo | ASC92_14735 | Not Available | Negative | 4280965 - 4282371 | 50840.3 |
| polyhydroxyalkanoate biosynthesis repressor phar | ASC92_14740 | Not Available | Negative | 4282411 - 4282971 | 21148.8 |
| hypothetical protein | ASC92_14745 | Not Available | Negative | 4283046 - 4283414 | 13582.9 |
| Trna-val | Not Available | Not Available | Positive | 4283583 - 4283659 | Not Available |
| gtp pyrophosphokinase | ASC92_14755 | Not Available | Negative | 4283708 - 4285948 | 81865.1 |
| alpha/beta hydrolase | ASC92_14760 | Not Available | Negative | 4285960 - 4286949 | 35443.2 |
| 3-hydroxybutyrate dehydrogenase | ASC92_14765 | Not Available | Positive | 4286976 - 4287746 | 26897.3 |
| hypothetical protein | ASC92_14770 | Not Available | Negative | 4287774 - 4288481 | 24528.3 |
| hypothetical protein | ASC92_14775 | Not Available | Positive | 4288666 - 4288902 | 8451.89 |
| two-component system response regulator | ASC92_14780 | Not Available | Positive | 4289072 - 4289803 | 27176.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
