Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-acp dehydratase | ASC92_14635 | Not Available | Negative | 4260758 - 4261216 | 17050.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | ASC92_14640 | Not Available | Negative | 4261240 - 4262217 | 34143.1 |
| hypothetical protein | ASC92_14645 | Not Available | Negative | 4262232 - 4262777 | 20351.2 |
| outer membrane protein assembly factor bama | ASC92_14650 | Not Available | Negative | 4262778 - 4265249 | 90909.3 |
| rip metalloprotease rsep | ASC92_14655 | Not Available | Negative | 4265288 - 4266661 | 49264.2 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | ASC92_14660 | Not Available | Negative | 4266690 - 4267880 | 41950.8 |
| phosphatidate cytidylyltransferase | ASC92_14665 | Not Available | Negative | 4267877 - 4268722 | 30633.8 |
| udp diphosphate synthase | ASC92_14670 | Not Available | Negative | 4268742 - 4269461 | 26093.3 |
| ribosome-recycling factor | ASC92_14675 | Not Available | Negative | 4269470 - 4270030 | 20627.8 |
| uridylate kinase | ASC92_14680 | Not Available | Negative | 4270042 - 4270764 | 25350.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
