Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_01865 | Not Available | Positive | 418724 - 419125 | 14974.8 |
| bile acid:sodium symporter | ASC92_01870 | Not Available | Positive | 419306 - 420301 | 35350.9 |
| hypothetical protein | ASC92_01875 | Not Available | Negative | 420306 - 421967 | 59766.8 |
| metallophosphatase | ASC92_01880 | Not Available | Negative | 422032 - 422886 | 30977.9 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | ASC92_01885 | Not Available | Negative | 422883 - 423944 | 38160.2 |
| abc transporter permease | ASC92_01890 | Not Available | Negative | 423934 - 424734 | 28904.2 |
| abc transporter permease | ASC92_01895 | Not Available | Negative | 424748 - 425569 | 29383.2 |
| abc transporter substrate-binding protein | ASC92_01900 | Not Available | Negative | 425832 - 426842 | 36250.5 |
| laci family transcriptional regulator | ASC92_01905 | Not Available | Negative | 426886 - 427905 | 35699.0 |
| signal peptidase ii | ASC92_01910 | Not Available | Negative | 428049 - 428564 | 18835.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
