Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ASC92_13980 | Not Available | Negative | 4116831 - 4117997 | 40892.9 |
| lysr family transcriptional regulator | ASC92_13985 | Not Available | Positive | 4118076 - 4118963 | 32380.2 |
| cysteine methyltransferase | ASC92_13990 | Not Available | Negative | 4118964 - 4119500 | 18947.9 |
| mfs transporter | ASC92_13995 | Not Available | Negative | 4119497 - 4120738 | 42366.5 |
| lactate dehydrogenase | ASC92_14000 | Not Available | Negative | 4120779 - 4123856 | 110759.0 |
| gntr family transcriptional regulator | ASC92_14005 | Not Available | Negative | 4123876 - 4124568 | 25691.3 |
| serine--glyoxylate aminotransferase | ASC92_14010 | Not Available | Positive | 4124689 - 4125930 | 44209.4 |
| laci family transcriptional regulator | ASC92_14015 | Not Available | Positive | 4126012 - 4126989 | 34234.3 |
| 2-keto-4-pentenoate hydratase | ASC92_14020 | Not Available | Positive | 4127285 - 4128055 | 27029.9 |
| pas domain s-box/diguanylate cyclase (ggdef) domain-containing protein | ASC92_14025 | Not Available | Negative | 4128068 - 4130845 | 101262.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
