Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_13830 | Not Available | Positive | 4084080 - 4086725 | 96677.3 |
| low-complexity protein | ASC92_13835 | Not Available | Positive | 4086722 - 4087840 | 41096.1 |
| hypothetical protein | ASC92_13840 | Not Available | Positive | 4087837 - 4088583 | 26425.5 |
| type vi secretion protein | ASC92_13845 | Not Available | Positive | 4088608 - 4088994 | 13431.6 |
| mfs transporter | ASC92_13850 | Not Available | Negative | 4089012 - 4089992 | 34407.7 |
| phospholipase | ASC92_13855 | Not Available | Negative | 4090114 - 4091196 | 40220.9 |
| hypothetical protein | ASC92_13860 | Not Available | Negative | 4091201 - 4092334 | 42090.2 |
| rna-binding transcriptional accessory protein | ASC92_13865 | Not Available | Negative | 4092352 - 4094727 | 86325.9 |
| histidine kinase | ASC92_13870 | Not Available | Negative | 4094808 - 4095782 | 35303.1 |
| luxr family transcriptional regulator | ASC92_13875 | Not Available | Negative | 4095791 - 4096585 | 29192.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
