Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein e | ASC92_01815 | Not Available | Positive | 407073 - 408869 | 66051.3 |
| hypothetical protein | ASC92_01820 | Not Available | Positive | 409004 - 409492 | 17201.9 |
| hypothetical protein | ASC92_01825 | Not Available | Positive | 409512 - 410939 | 49763.2 |
| lysr family transcriptional regulator | ASC92_01830 | Not Available | Negative | 411083 - 412009 | 33479.0 |
| mfs transporter | ASC92_01835 | Not Available | Positive | 412105 - 413076 | 34179.4 |
| gamma-glutamyltransferase | ASC92_01840 | Not Available | Positive | 413093 - 414706 | 57587.7 |
| multidrug dmt transporter permease | ASC92_01845 | Not Available | Positive | 414728 - 415690 | 33947.9 |
| 3-oxoacyl-acp reductase | ASC92_01850 | Not Available | Positive | 415701 - 416495 | 27050.4 |
| hypothetical protein | ASC92_01855 | Not Available | Negative | 416612 - 417520 | 33018.2 |
| quinone oxidoreductase | ASC92_01860 | Not Available | Positive | 417629 - 418612 | 34548.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
