Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase | ASC92_13780 | Not Available | Negative | 4073039 - 4074052 | 36150.5 |
| thymidylate kinase | ASC92_13785 | Not Available | Negative | 4074052 - 4074705 | 23494.9 |
| aminodeoxychorismate lyase | ASC92_13790 | Not Available | Negative | 4074702 - 4075727 | 37081.7 |
| folate-binding protein | ASC92_13795 | Not Available | Positive | 4075842 - 4076768 | 31927.4 |
| hypothetical protein | ASC92_13800 | Not Available | Positive | 4076916 - 4077824 | 32473.0 |
| 4-hydroxybenzoyl-coa thioesterase | ASC92_13805 | Not Available | Negative | 4077818 - 4078705 | 32993.5 |
| alpha/beta hydrolase | ASC92_13810 | Not Available | Negative | 4078702 - 4079685 | 34902.9 |
| 4-hydroxybutyrate dehydrogenase | ASC92_13815 | Not Available | Positive | 4079751 - 4080887 | 40000.3 |
| type vi secretion protein vgr | ASC92_13820 | Not Available | Positive | 4081267 - 4083609 | 86398.8 |
| hypothetical protein | ASC92_13825 | Not Available | Positive | 4083618 - 4084055 | 16166.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
