Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein tade | ASC92_13680 | Not Available | Positive | 4053916 - 4054344 | 15247.8 |
| histidine kinase | ASC92_13685 | Not Available | Positive | 4054364 - 4055515 | 41272.7 |
| pilus assembly protein cpaf | ASC92_13690 | Not Available | Positive | 4055552 - 4056916 | 50550.7 |
| pilus assembly protein tadb | ASC92_13695 | Not Available | Positive | 4056927 - 4057919 | 37001.5 |
| type ii secretion system protein | ASC92_13700 | Not Available | Positive | 4057932 - 4058843 | 32997.1 |
| luxr family transcriptional regulator | ASC92_13705 | Not Available | Negative | 4058875 - 4059567 | 24969.2 |
| histidine kinase | ASC92_13710 | Not Available | Negative | 4059593 - 4061275 | 60982.1 |
| hypothetical protein | ASC92_13715 | Not Available | Negative | 4061513 - 4061989 | 17406.1 |
| hypothetical protein | ASC92_13720 | Not Available | Negative | 4062274 - 4063632 | 43895.0 |
| hypothetical protein | ASC92_13725 | Not Available | Negative | 4063629 - 4064462 | 31042.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
