Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphatase | ASC92_13630 | Not Available | Positive | 4044015 - 4045142 | 40222.4 |
| gtp-binding protein | ASC92_13635 | Not Available | Positive | 4045139 - 4047775 | 95126.0 |
| peptidase a24 | ASC92_13640 | Not Available | Positive | 4048152 - 4048736 | 20134.5 |
| flp pilus assembly protein cpab | ASC92_13645 | Not Available | Positive | 4048781 - 4049626 | 29257.7 |
| type ii and iii secretion system protein | ASC92_13650 | Not Available | Positive | 4049652 - 4051175 | 52593.6 |
| hypothetical protein | ASC92_13655 | Not Available | Positive | 4051187 - 4051468 | 9805.74 |
| hypothetical protein | ASC92_13660 | Not Available | Positive | 4051608 - 4051817 | 7329.13 |
| pilus assembly protein | ASC92_13665 | Not Available | Positive | 4051925 - 4052104 | 6237.83 |
| hypothetical protein | ASC92_13670 | Not Available | Positive | 4052227 - 4053450 | 42339.4 |
| pilus assembly protein tade | ASC92_13675 | Not Available | Positive | 4053461 - 4053919 | 16256.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
