Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine protein kinase | ASC92_13580 | Not Available | Negative | 4022923 - 4025247 | 83487.6 |
| sugar transporter | ASC92_13585 | Not Available | Negative | 4025283 - 4026440 | 40592.1 |
| hypothetical protein | ASC92_13590 | Not Available | Negative | 4026579 - 4027457 | 31864.2 |
| alpha/beta hydrolase | ASC92_13595 | Not Available | Negative | 4027501 - 4028322 | 30361.0 |
| 4-phosphopantetheinyl transferase | ASC92_13600 | Not Available | Negative | 4028319 - 4029032 | 25521.6 |
| non-ribosomal peptide synthetase | ASC92_13605 | Not Available | Negative | 4029035 - 4034029 | 181813.0 |
| thioester reductase | ASC92_13610 | Not Available | Negative | 4034026 - 4041345 | 258690.0 |
| methyltransferase | ASC92_13615 | Not Available | Positive | 4041898 - 4042782 | 31982.2 |
| lipoprotein nlpd | ASC92_13620 | Not Available | Positive | 4042936 - 4043607 | 23459.8 |
| hypothetical protein | ASC92_13625 | Not Available | Positive | 4043712 - 4043894 | 6760.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
