Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | ASC92_13530 | Not Available | Negative | 4012351 - 4013127 | 28056.7 |
| udp-glucose 4-epimerase | ASC92_13535 | Not Available | Negative | 4013120 - 4014229 | 39136.5 |
| glycosyl transferase | ASC92_13540 | Not Available | Negative | 4014258 - 4015505 | 45496.1 |
| polysaccharide biosynthesis protein | ASC92_13545 | Not Available | Negative | 4015502 - 4016761 | 44807.4 |
| hypothetical protein | ASC92_13550 | Not Available | Negative | 4016775 - 4017713 | 34640.6 |
| hypothetical protein | ASC92_13555 | Not Available | Negative | 4017759 - 4018646 | 31612.9 |
| glycosyl transferase family 1 | ASC92_13560 | Not Available | Negative | 4018709 - 4019785 | 40662.1 |
| hypothetical protein | ASC92_13565 | Not Available | Negative | 4019799 - 4021124 | 47351.6 |
| gdp-fucose synthetase | ASC92_13570 | Not Available | Negative | 4021164 - 4022159 | 36670.7 |
| udp-phosphate galactose phosphotransferase | ASC92_13575 | Not Available | Negative | 4022222 - 4022926 | 26526.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
