Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein paay | ASC92_01765 | Not Available | Positive | 398830 - 399432 | 21235.7 |
| tetr family transcriptional regulator | ASC92_01770 | Not Available | Positive | 399498 - 400139 | 23427.9 |
| abc transporter atp-binding protein | ASC92_01775 | Not Available | Negative | 400123 - 401160 | 37266.7 |
| atpase | ASC92_01780 | Not Available | Negative | 401157 - 402146 | 36926.5 |
| atpase | ASC92_01785 | Not Available | Negative | 402127 - 403140 | 36947.0 |
| peptidase s1 | ASC92_01790 | Not Available | Negative | 403166 - 404176 | 34543.2 |
| dnaase | ASC92_01795 | Not Available | Positive | 404264 - 405124 | 31009.2 |
| hypothetical protein | ASC92_01800 | Not Available | Positive | 405254 - 405670 | 14002.8 |
| dna-deoxyinosine glycosylase | ASC92_01805 | Not Available | Positive | 405764 - 406291 | 19000.8 |
| spermidine synthase | ASC92_01810 | Not Available | Positive | 406291 - 407076 | 29206.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
