Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid abc transporter permease | ASC92_13275 | Not Available | Negative | 3963067 - 3963726 | 24395.7 |
| fis family transcriptional regulator | ASC92_13280 | Not Available | Negative | 3963739 - 3964404 | 24434.8 |
| l-idonate 5-dehydrogenase | ASC92_13285 | Not Available | Negative | 3964451 - 3965488 | 36626.3 |
| abc transporter substrate-binding protein | ASC92_13290 | Not Available | Negative | 3965596 - 3966447 | 30615.2 |
| abc transporter substrate-binding protein | ASC92_13295 | Not Available | Negative | 3966482 - 3967327 | 30176.4 |
| gntr family transcriptional regulator | ASC92_13300 | Not Available | Negative | 3967386 - 3968108 | 26520.5 |
| histidine kinase | ASC92_13305 | Not Available | Negative | 3968205 - 3968561 | 12404.7 |
| histidine kinase | ASC92_13310 | Not Available | Negative | 3968578 - 3969792 | 45187.9 |
| chemotaxis protein cheb | ASC92_13315 | Not Available | Negative | 3969782 - 3970387 | 21632.2 |
| chemotaxis protein cher | ASC92_13320 | Not Available | Negative | 3970384 - 3971199 | 30767.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
