Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | ASC92_13225 | Not Available | Positive | 3954253 - 3954897 | 23942.8 |
| hypothetical protein | ASC92_13230 | Not Available | Positive | 3954899 - 3955120 | 7442.13 |
| cmp deaminase | ASC92_13235 | Not Available | Positive | 3955110 - 3956219 | 39339.9 |
| ld-carboxypeptidase | ASC92_13240 | Not Available | Positive | 3956216 - 3957184 | 34603.5 |
| hypothetical protein | ASC92_13245 | Not Available | Negative | 3957244 - 3957579 | 12207.9 |
| adenylate cyclase | ASC92_13250 | Not Available | Positive | 3957917 - 3958864 | 34307.1 |
| hypothetical protein | ASC92_13255 | Not Available | Positive | 3959119 - 3959493 | 13540.2 |
| mannitol dehydrogenase | ASC92_13260 | Not Available | Negative | 3959517 - 3961025 | 54200.7 |
| bifunctional d-altronate/d-mannonate dehydratase | ASC92_13265 | Not Available | Negative | 3961040 - 3962251 | 45029.6 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | ASC92_13270 | Not Available | Negative | 3962279 - 3963070 | 28440.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
