Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death protein | ASC92_13175 | Not Available | Positive | 3946007 - 3946255 | 9108.14 |
| dna-binding protein | ASC92_13180 | Not Available | Positive | 3946267 - 3946686 | 15204.2 |
| gmp synthetase | ASC92_13185 | Not Available | Positive | 3946699 - 3948315 | 59066.2 |
| hypothetical protein | ASC92_13190 | Not Available | Negative | 3948334 - 3948672 | 12214.6 |
| hypothetical protein | ASC92_13195 | Not Available | Positive | 3949132 - 3949626 | 17431.9 |
| hypothetical protein | ASC92_13200 | Not Available | Negative | 3949623 - 3950705 | 39029.8 |
| histidine kinase | ASC92_13205 | Not Available | Positive | 3950768 - 3952246 | 53324.2 |
| luxr family transcriptional regulator | ASC92_13210 | Not Available | Positive | 3952243 - 3952881 | 23222.0 |
| hypothetical protein | ASC92_13215 | Not Available | Positive | 3953000 - 3953509 | 16709.0 |
| hypothetical protein | ASC92_13220 | Not Available | Positive | 3953509 - 3954207 | 24333.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
