Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | ASC92_13075 | Not Available | Positive | 3919817 - 3920812 | 36821.2 |
| microcin abc transporter atp-binding protein | ASC92_13080 | Not Available | Positive | 3920812 - 3922446 | 58617.7 |
| mfs transporter | ASC92_13085 | Not Available | Positive | 3922463 - 3923665 | 41017.8 |
| ribosome maturation protein rimp | ASC92_13090 | Not Available | Positive | 3923861 - 3924508 | 23280.7 |
| transcription elongation factor nusa | ASC92_13095 | Not Available | Positive | 3924525 - 3926018 | 55121.7 |
| translation initiation factor if-2 | ASC92_13100 | Not Available | Positive | 3926043 - 3929033 | 106049.0 |
| ribosome-binding factor a | ASC92_13105 | Not Available | Positive | 3929058 - 3929429 | 13731.5 |
| trna pseudouridine synthase b | ASC92_13110 | Not Available | Positive | 3929432 - 3930388 | 34124.0 |
| gtp-binding protein typa | ASC92_13115 | Not Available | Positive | 3930385 - 3932223 | 67369.8 |
| permease | ASC92_13120 | Not Available | Positive | 3932249 - 3933166 | 32364.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
