Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_13025 | Not Available | Negative | 3910017 - 3910406 | 14091.9 |
| hypothetical protein | ASC92_13030 | Not Available | Negative | 3910505 - 3910861 | 12920.0 |
| Trna-ser | Not Available | Not Available | Positive | 3911060 - 3911150 | Not Available |
| stomatin 2 | ASC92_13040 | Not Available | Negative | 3911176 - 3912105 | 33600.6 |
| hypothetical protein | ASC92_13045 | Not Available | Negative | 3912154 - 3912579 | 14861.9 |
| lysine decarboxylase | ASC92_13050 | Not Available | Positive | 3912797 - 3915094 | 86205.0 |
| atp-dependent dna ligase | ASC92_13055 | Not Available | Negative | 3915124 - 3915966 | 31364.7 |
| enoyl-acp reductase | ASC92_13060 | Not Available | Negative | 3916029 - 3916811 | 27475.8 |
| peptide abc transporter substrate-binding protein | ASC92_13065 | Not Available | Positive | 3916849 - 3918663 | 68540.7 |
| microcin abc transporter permease | ASC92_13070 | Not Available | Positive | 3918682 - 3919722 | 38075.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
