Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | ASC92_12975 | Not Available | Positive | 3897229 - 3901080 | 143878.0 |
| aminotransferase | ASC92_12980 | Not Available | Negative | 3901456 - 3902628 | 42450.2 |
| transcriptional regulator | ASC92_12985 | Not Available | Negative | 3902625 - 3903566 | 34971.2 |
| cobalamin biosynthesis protein cbix | ASC92_12990 | Not Available | Negative | 3903630 - 3903992 | 13145.0 |
| lps export abc transporter permease lptg | ASC92_12995 | Not Available | Negative | 3903989 - 3905098 | 41392.6 |
| lps export abc transporter permease lptf | ASC92_13000 | Not Available | Negative | 3905095 - 3906219 | 41259.6 |
| aminopeptidase | ASC92_13005 | Not Available | Positive | 3906241 - 3907755 | 51429.6 |
| dna polymerase iii subunit chi | ASC92_13010 | Not Available | Positive | 3907752 - 3908192 | 16153.1 |
| hypothetical protein | ASC92_13015 | Not Available | Positive | 3908194 - 3908589 | 13879.6 |
| branched-chain amino acid abc transporter substrate-binding protein | ASC92_13020 | Not Available | Positive | 3908727 - 3909932 | 41578.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
