Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | ASC92_12925 | Not Available | Positive | 3886399 - 3886632 | 8584.52 |
| hypothetical protein | ASC92_12930 | Not Available | Negative | 3886820 - 3887323 | 17776.0 |
| abc transporter | ASC92_12935 | Not Available | Negative | 3887352 - 3889346 | 72868.2 |
| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific | ASC92_12940 | Not Available | Negative | 3889472 - 3890359 | 31974.8 |
| succinyl-diaminopimelate desuccinylase | ASC92_12945 | Not Available | Negative | 3890356 - 3891534 | 41773.6 |
| type iv pili twitching motility protein pilt | ASC92_12950 | Not Available | Negative | 3891658 - 3892806 | 41925.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ASC92_12955 | Not Available | Negative | 3892861 - 3893694 | 29729.4 |
| succinyldiaminopimelate transaminase | ASC92_12960 | Not Available | Negative | 3893735 - 3894964 | 44197.5 |
| amino acid transporter | ASC92_12965 | Not Available | Negative | 3895036 - 3895677 | 22256.8 |
| n-acetylglutamate synthase | ASC92_12970 | Not Available | Negative | 3895692 - 3897038 | 49433.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
