Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s rrna methyltransferase | ASC92_12875 | Not Available | Positive | 3877135 - 3877602 | 17244.8 |
| septum formation inhibitor maf | ASC92_12880 | Not Available | Positive | 3877643 - 3878245 | 21182.4 |
| ribonuclease | ASC92_12885 | Not Available | Positive | 3878253 - 3879779 | 56339.9 |
| lipid a export permease/atp-binding protein msba | ASC92_12890 | Not Available | Negative | 3879787 - 3881571 | 64827.4 |
| translocation protein tolb | ASC92_12895 | Not Available | Positive | 3881826 - 3883052 | 43557.1 |
| peptidoglycan-binding protein | ASC92_12900 | Not Available | Positive | 3883081 - 3883599 | 18395.7 |
| tol-pal system protein | ASC92_12905 | Not Available | Positive | 3883599 - 3884348 | 27909.0 |
| heme biosynthesis protein hemy | ASC92_12910 | Not Available | Positive | 3884368 - 3885225 | 29667.3 |
| Trna-lys | Not Available | Not Available | Positive | 3885275 - 3885350 | Not Available |
| xre family transcriptional regulator | ASC92_12920 | Not Available | Negative | 3885613 - 3886281 | 24617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
