Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-binding protein | ASC92_12675 | Not Available | Negative | 3840073 - 3840864 | 29490.2 |
| cytochrome b | ASC92_12680 | Not Available | Negative | 3840861 - 3841511 | 24079.1 |
| two-component system response regulator | ASC92_12685 | Not Available | Positive | 3841609 - 3842334 | 27101.7 |
| histidine kinase | ASC92_12690 | Not Available | Positive | 3842331 - 3843821 | 53927.4 |
| transglutaminase | ASC92_12695 | Not Available | Negative | 3843855 - 3844763 | 33758.0 |
| fad-dependent cmnm(5)s(2)u34 oxidoreductase | ASC92_12700 | Not Available | Negative | 3844895 - 3846739 | 66217.0 |
| iron transporter | ASC92_12705 | Not Available | Negative | 3846754 - 3847029 | 10332.5 |
| sulfate transporter subunit | ASC92_12710 | Not Available | Positive | 3847177 - 3848229 | 38135.3 |
| nadph-dependent fmn reductase | ASC92_12715 | Not Available | Positive | 3848331 - 3848915 | 20815.5 |
| abc transporter substrate-binding protein | ASC92_12720 | Not Available | Positive | 3849209 - 3850168 | 33561.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
