Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ASC92_12525 | Not Available | Negative | 3808787 - 3810937 | 78738.1 |
| thiamine-phosphate diphosphorylase | ASC92_12530 | Not Available | Negative | 3810943 - 3811878 | 32466.6 |
| thiazole synthase | ASC92_12535 | Not Available | Negative | 3811875 - 3812684 | 28846.9 |
| thiamine biosynthesis protein this | ASC92_12540 | Not Available | Negative | 3812703 - 3812906 | 7130.61 |
| glycine oxidase | ASC92_12545 | Not Available | Negative | 3812903 - 3813994 | 38949.3 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | ASC92_12550 | Not Available | Positive | 3814135 - 3814983 | 28829.1 |
| allantoin permease | ASC92_12555 | Not Available | Negative | 3814928 - 3816271 | 46770.7 |
| ferredoxin-nadp reductase | ASC92_12560 | Not Available | Negative | 3816613 - 3817644 | 36116.5 |
| ferredoxin | ASC92_12565 | Not Available | Negative | 3817647 - 3817976 | 12100.5 |
| sulfate adenylyltransferase | ASC92_12570 | Not Available | Negative | 3818018 - 3819358 | 47684.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
