Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate 3-monooxygenase | ASC92_12325 | Not Available | Negative | 3754491 - 3755672 | 43513.7 |
| iclr family transcriptional regulator | ASC92_12330 | Not Available | Positive | 3755805 - 3756575 | 28105.1 |
| two-component system response regulator | ASC92_12335 | Not Available | Positive | 3756627 - 3757286 | 24611.0 |
| histidine kinase | ASC92_12340 | Not Available | Positive | 3757396 - 3758775 | 48968.3 |
| peptidase | ASC92_12345 | Not Available | Positive | 3758838 - 3760322 | 51369.4 |
| dna-binding transcriptional regulator | ASC92_12350 | Not Available | Negative | 3760379 - 3761365 | 36242.8 |
| aldehyde-activating protein | ASC92_12355 | Not Available | Positive | 3761453 - 3761857 | 14955.7 |
| transcription elongation factor greab | ASC92_12360 | Not Available | Negative | 3761891 - 3762292 | 14315.3 |
| hypothetical protein | ASC92_12365 | Not Available | Negative | 3762909 - 3763355 | 16891.3 |
| hypothetical protein | ASC92_12370 | Not Available | Positive | 3763652 - 3764833 | 42441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
