Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb | ASC92_01665 | Not Available | Negative | 378724 - 379110 | 13620.5 |
| hypothetical protein | ASC92_01670 | Not Available | Negative | 379337 - 380167 | 29688.1 |
| glycosyl transferase family 39 | ASC92_01675 | Not Available | Negative | 380160 - 381740 | 57313.3 |
| glycosyl transferase family 2 | ASC92_01680 | Not Available | Negative | 381737 - 382672 | 34168.5 |
| phosphoesterase pa-phosphatase | ASC92_01685 | Not Available | Negative | 382786 - 383382 | 21353.5 |
| hypothetical protein | ASC92_01690 | Not Available | Negative | 383542 - 383991 | 16456.0 |
| isoprenylcysteine carboxyl methyltransferase | ASC92_01695 | Not Available | Negative | 384084 - 384644 | 21257.4 |
| enoyl-coa hydratase | ASC92_01700 | Not Available | Negative | 384685 - 386745 | 72511.6 |
| abc transporter atp-binding protein | ASC92_01705 | Not Available | Negative | 386897 - 387628 | 26880.1 |
| hypothetical protein | ASC92_01710 | Not Available | Negative | 387625 - 389529 | 66839.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
