Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | ASC92_12275 | Not Available | Positive | 3742115 - 3743131 | 36703.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | ASC92_12280 | Not Available | Positive | 3743317 - 3744141 | 30161.8 |
| 2-isopropylmalate synthase | ASC92_12285 | Not Available | Positive | 3744327 - 3746030 | 62919.0 |
| 2-isopropylmalate synthase | ASC92_12290 | Not Available | Positive | 3746074 - 3747612 | 55207.5 |
| d-alanyl-d-alanine carboxypeptidase | ASC92_12295 | Not Available | Positive | 3747729 - 3748919 | 42688.5 |
| iclr family transcriptional regulator | ASC92_12300 | Not Available | Negative | 3749011 - 3749838 | 29952.1 |
| arginyl-trna-protein transferase | ASC92_12305 | Not Available | Negative | 3749869 - 3750702 | 31404.3 |
| leucyl/phenylalanyl-trna--protein transferase | ASC92_12310 | Not Available | Negative | 3750699 - 3751454 | 27587.1 |
| carbon monoxide dehydrogenase | ASC92_12315 | Not Available | Positive | 3751658 - 3753988 | 82394.7 |
| polyketide cyclase | ASC92_12320 | Not Available | Positive | 3754078 - 3754494 | 14774.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
